WEB-based GEne SeT AnaLysis Toolkit
 
Translating gene lists into biological insights...
 


User data and parameters: User data: textAreaUpload.txt, Organism: hsapiens, Id Type: ensembl_gene_stable_id, Ref Set: entrezgene, Significance Level: Top10, Statistics Test: Hypergeometric, MTC: BH, Minimum: 2

The results for each enriched gene sets are listed in this table.
For each gene set, the first row lists database name, gene set name , and corresponding gene set ID. The second row lists the following statistics:
Finally, genes in the gene set are listed. For each gene, the table lists the user uploaded ID and value (optional), Entrez ID, Ensembl Gene Stable ID, Gene symbol, and description. Ensembl Gene Stable ID and Entrez Gene ID are linked to the Ensembl and Entrez Gene databases, respectively.

Database:Transcription Target       Name:hsa_CTTTGT_V$LEF1_Q2       ID:DB_ID:2428
C=1939; O=7; E=1.62; R=4.32; rawP=0.0010; adjP=0.0150
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000107518 NA ATRNL1 attractin-like 1 26033 ENSG00000107518
2  ENSG00000147180 NA ZNF711 zinc finger protein 711 7552 ENSG00000147180
3  ENSG00000184349 NA EFNA5 ephrin-A5 1946 ENSG00000184349
4  ENSG00000143816 NA WNT9A wingless-type MMTV integration site family, member 9A 7483 ENSG00000143816
5  ENSG00000112280 NA COL9A1 collagen, type IX, alpha 1 1297 ENSG00000112280
6  ENSG00000157240 NA FZD1 frizzled family receptor 1 8321 ENSG00000157240
7  ENSG00000170743 NA SYT9 synaptotagmin IX 143425 ENSG00000170743


Database:Transcription Target       Name:hsa_V$E4BP4_01       ID:DB_ID:1869
C=220; O=3; E=0.18; R=16.34; rawP=0.0008; adjP=0.0150
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000147180 NA ZNF711 zinc finger protein 711 7552 ENSG00000147180
2  ENSG00000139174 NA PRICKLE1 prickle homolog 1 (Drosophila) 144165 ENSG00000139174
3  ENSG00000107295 NA SH3GL2 SH3-domain GRB2-like 2 6456 ENSG00000107295


Database:Transcription Target       Name:hsa_AACTTT_UNKNOWN       ID:DB_ID:1851
C=1859; O=7; E=1.55; R=4.51; rawP=0.0008; adjP=0.0150
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000139174 NA PRICKLE1 prickle homolog 1 (Drosophila) 144165 ENSG00000139174
2  ENSG00000184349 NA EFNA5 ephrin-A5 1946 ENSG00000184349
3  ENSG00000114737 NA CISH cytokine inducible SH2-containing protein 1154 ENSG00000114737
4  ENSG00000112280 NA COL9A1 collagen, type IX, alpha 1 1297 ENSG00000112280
5  ENSG00000107295 NA SH3GL2 SH3-domain GRB2-like 2 6456 ENSG00000107295
6  ENSG00000120833 NA SOCS2 suppressor of cytokine signaling 2 8835 ENSG00000120833
7  ENSG00000170743 NA SYT9 synaptotagmin IX 143425 ENSG00000170743


Database:Transcription Target       Name:hsa_CTTTGA_V$LEF1_Q2       ID:DB_ID:2427
C=1208; O=6; E=1.01; R=5.95; rawP=0.0005; adjP=0.0150
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000184349 NA EFNA5 ephrin-A5 1946 ENSG00000184349
2  ENSG00000114737 NA CISH cytokine inducible SH2-containing protein 1154 ENSG00000114737
3  ENSG00000143816 NA WNT9A wingless-type MMTV integration site family, member 9A 7483 ENSG00000143816
4  ENSG00000243056 NA EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 8637 ENSG00000243056
5  ENSG00000156427 NA FGF18 fibroblast growth factor 18 8817 ENSG00000156427
6  ENSG00000120833 NA SOCS2 suppressor of cytokine signaling 2 8835 ENSG00000120833


Database:Transcription Target       Name:hsa_TGGAAA_V$NFAT_Q4_01       ID:DB_ID:2437
C=1871; O=7; E=1.56; R=4.48; rawP=0.0008; adjP=0.0150
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000107518 NA ATRNL1 attractin-like 1 26033 ENSG00000107518
2  ENSG00000147180 NA ZNF711 zinc finger protein 711 7552 ENSG00000147180
3  ENSG00000135272 NA MDFIC MyoD family inhibitor domain containing 29969 ENSG00000135272
4  ENSG00000114737 NA CISH cytokine inducible SH2-containing protein 1154 ENSG00000114737
5  ENSG00000186417 NA GLDN gliomedin 342035 ENSG00000186417
6  ENSG00000109062 NA SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 9368 ENSG00000109062
7  ENSG00000120833 NA SOCS2 suppressor of cytokine signaling 2 8835 ENSG00000120833


Database:Transcription Target       Name:hsa_V$ETS2_B       ID:DB_ID:2058
C=272; O=3; E=0.23; R=13.21; rawP=0.0015; adjP=0.0161
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000180957 NA PITPNB phosphatidylinositol transfer protein, beta 23760 ENSG00000180957
2  ENSG00000143816 NA WNT9A wingless-type MMTV integration site family, member 9A 7483 ENSG00000143816
3  ENSG00000109062 NA SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 9368 ENSG00000109062


Database:Transcription Target       Name:hsa_V$AP4_Q5       ID:DB_ID:1966
C=270; O=3; E=0.23; R=13.31; rawP=0.0015; adjP=0.0161
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000107518 NA ATRNL1 attractin-like 1 26033 ENSG00000107518
2  ENSG00000139174 NA PRICKLE1 prickle homolog 1 (Drosophila) 144165 ENSG00000139174
3  ENSG00000143816 NA WNT9A wingless-type MMTV integration site family, member 9A 7483 ENSG00000143816


Database:Transcription Target       Name:hsa_GGGCGGR_V$SP1_Q6       ID:DB_ID:2452
C=2891; O=8; E=2.41; R=3.32; rawP=0.0022; adjP=0.0206
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000105204 NA DYRK1B dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1B 9149 ENSG00000105204
2  ENSG00000114737 NA CISH cytokine inducible SH2-containing protein 1154 ENSG00000114737
3  ENSG00000109062 NA SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 9368 ENSG00000109062
4  ENSG00000120833 NA SOCS2 suppressor of cytokine signaling 2 8835 ENSG00000120833
5  ENSG00000139174 NA PRICKLE1 prickle homolog 1 (Drosophila) 144165 ENSG00000139174
6  ENSG00000107518 NA ATRNL1 attractin-like 1 26033 ENSG00000107518
7  ENSG00000184349 NA EFNA5 ephrin-A5 1946 ENSG00000184349
8  ENSG00000135272 NA MDFIC MyoD family inhibitor domain containing 29969 ENSG00000135272


Database:Transcription Target       Name:hsa_GATTGGY_V$NFY_Q6_01       ID:DB_ID:2440
C=1141; O=5; E=0.95; R=5.25; rawP=0.0025; adjP=0.0208
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000147180 NA ZNF711 zinc finger protein 711 7552 ENSG00000147180
2  ENSG00000104332 NA SFRP1 secreted frizzled-related protein 1 6422 ENSG00000104332
3  ENSG00000184349 NA EFNA5 ephrin-A5 1946 ENSG00000184349
4  ENSG00000114737 NA CISH cytokine inducible SH2-containing protein 1154 ENSG00000114737
5  ENSG00000109062 NA SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 9368 ENSG00000109062


Database:Transcription Target       Name:hsa_TGCCAAR_V$NF1_Q6       ID:DB_ID:2436
C=709; O=4; E=0.59; R=6.76; rawP=0.0028; adjP=0.0210
Index UserID Value Gene Symbol Gene Name EntrezGene Ensembl
1  ENSG00000147180 NA ZNF711 zinc finger protein 711 7552 ENSG00000147180
2  ENSG00000243056 NA EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3 8637 ENSG00000243056
3  ENSG00000109062 NA SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 9368 ENSG00000109062
4  ENSG00000170743 NA SYT9 synaptotagmin IX 143425 ENSG00000170743




WebGestalt is currently developed and maintained by Jing Wang and Bing Zhang at the Zhang Lab. Other people who have made significant contribution to the project include Dexter Duncan, Stefan Kirov, Zhiao Shi, and Jay Snoddy.

Funding credits: NIH/NIAAA (U01 AA016662, U01 AA013512); NIH/NIDA (P01 DA015027); NIH/NIMH (P50 MH078028, P50 MH096972); NIH/NCI (U24 CA159988); NIH/NIGMS (R01 GM088822).